Submissions from 2022
Composition, Structure and Diversity of Soil Bacterial Communities before, during and after Transit through the Gut of the Earthworm, Manuel Aira, Marcos Pérez-Losada, Keith A. Crandall, and Jorge Domínguez
Host taxonomy determines the composition, structure, and diversity of the earthworm cast microbiome under homogenous feeding conditions, Manuel Aira, Marcos Pérez-Losada, Keith A. Crandall, and Jorge Domínguez
Dominant clade-featured SARS-CoV-2 co-occurring mutations reveal plausible epistasis: An in silico based hypothetical model, A. S.M.Rubayet Ul Alam, Ovinu Kibria Islam, Md Shazid Hasan, Mir Raihanul Islam, Shafi Mahmud, Hassan M. Al-Emran, Iqbal Kabir Jahid, Keith A. Crandall, and M. Anwar Hossain
Corrigendum to "The cross-sectional association of renal dysfunction with tests of cognition in middle-aged adults with early type 2 diabetes The GRADE Study" [J. Diabetes Complicat., 35 (3) (2021) 107805], Joshua I. Barzilay, Naji Younes, Rodica Pop-Busui, Hermes Florez, Elizabeth Seaquist, Corinna Falck-Ytter, and Jose A. Luchsinger
Mechanism of neonatal hypoglycemia after late preterm steroids: are fetal metabolic effects responsible?, Ashley N. Battarbee, Grecio J. Sandoval, Cynthia Gyamfi-Bannerman, Sean C. Blackwell, Alan T. Tita, Uma M. Reddy, and Lucky Jain
Why sequence all eukaryotes?, Mark Blaxter, John M. Archibald, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Federica Di Palma, Richard Durbin, Scott V. Edwards, Jennifer A.M. Graves, Kevin J. Hackett, Neil Hall, Erich D. Jarvis, Rebecca N. Johnson, Elinor K. Karlsson, W. John Kress, Shigehiro Kuraku, Mara K.N. Lawniczak, Kerstin Lindblad-Toh, Jose V. Lopez, Nancy A. Moran, Gene E. Robinson, Oliver A. Ryder, Beth Shapiro, Pamela S. Soltis, Tandy Warnow, Guojie Zhang, and Harris A. Lewin
Comparison of ETDRS 7-Field to 4-Widefield Digital Imaging in the Evaluation of Diabetic Retinopathy Severity, Barbara A. Blodi, Amitha Domalpally, Ashley H. Tjaden, Nancy Barrett, Emily Y. Chew, William C. Knowler, Christine G. Lee, Xavier Pi-Sunyer, Amisha Wallia, Neil H. White, and Marinella Temprosa
Islet Autoimmunity is Highly Prevalent and Associated With Diminished β-Cell Function in Patients With Type 2 Diabetes in the Grade Study, Barbara Brooks-Worrell, Christiane S. Hampe, Erica G. Hattery, Brenda Palomino, Sahar Z. Zangeneh, Kristina Utzschneider, Steven E. Kahn, Mary E. Larkin, Mary L. Johnson, Kieren J. Mather, Naji Younes, Neda Rasouli, Cyrus Desouza, Robert M. Cohen, Jean Y. Park, Hermes J. Florez, and Willy Marcos Valencia
Frailty and Depression in Late Life: A High-Risk Comorbidity With Distinctive Clinical Presentation and Poor Antidepressant Response, Patrick J. Brown, Adam Ciarleglio, Steven P. Roose, Carolina Montes Garcia, Sarah Chung, Sara Fernandes, and Bret R. Rutherford
A doubly robust method to handle missing multilevel outcome data with application to the China Health and Nutrition Survey., Nicole M. Butera, Donglin Zeng, Annie Green Howard, Penny Gordon-Larsen, and Jianwen Cai
Self-reported mask use among persons with or without SARS CoV-2 vaccination -United States, December 2020-August 2021, Lydia E. Calamari, Ashley H. Tjaden, Sharon L. Edelstein, William S. Weintraub, Roberto Santos, Michael Gibbs, Johnathan Ward, Michele Santacatterina, Alain G. Bertoni, Lori M. Ward, Sharon Saydah, Ian D. Plumb, and Michael S. Runyon
Weight gain trajectories and obesity rates in intensive and conventional treatments of type 1 diabetes from the DCCT compared with a control population without diabetes, Nichole E. Carlson, Ken W. Horton, John E. Hokanson, Patricia A. Cleary, David R. Jacobs, John D. Brunzell, and Jonathan Q. Purnell
Association of Body Mass Index With the Use of Health Care Resources in Low-Risk Nulliparous Pregnancies After 39 Weeks of Gestation, Maged M. Costantine, Grecio J. Sandoval, William A. Grobman, Uma M. Reddy, Alan T. Tita, Robert M. Silver, Yasser Y. El-Sayed, Ronald J. Wapner, Dwight J. Rouse, George R. Saade, John M. Thorp, Suneet P. Chauhan, Edward K. Chien, Brian M. Casey, Sindhu K. Srinivas, Geeta K. Swamy, and Hyagriv N. Simhan
Synthesizing studies for comparing different treatment sequences in clinical trials, Guoqing Diao, Haijun Ma, Donglin Zeng, Chunlei Ke, and Joseph G. Ibrahim
Guest editors' note on the special issue International Chinese Statistical Association (ICSA) Applied Statistics Symposium 2021, Guoqing Diao, Lu Mao, Fang Jin, and Junjing Lin
Amniocentesis to diagnose congenital cytomegalovirus infection following maternal primary infection, Mara J. Dinsmoor, Lida M. Fette, Brenna L. Hughes, Dwight J. Rouse, George R. Saade, Uma M. Reddy, Donna Allard, Gail Mallett, Elizabeth A. Thom, Cynthia Gyamfi-Bannerman, Michael W. Varner, William H. Goodnight, Alan T. Tita, Maged M. Costantine, Geeta K. Swamy, Kent D. Heyborne, Edward K. Chien, Suneet P. Chauhan, Yasser Y. El-Sayed, Brian M. Casey, Samuel Parry, Hyagriv N. Simhan, Peter G. Napolitano, and George A. Macones
Classification Performance and Feature Space Characteristics in Individuals With Upper Limb Loss Using Sonomyography., Susannah Engdahl, Ananya Dhawan, Ahmed Bashatah, Guoqing Diao, Biswarup Mukherjee, Brian Monroe, Rahsaan Holley, and Siddhartha Sikdar
Weighing Evidence: Robustness vs Quantity, Scott R. Evans and Toshimitsu Hamasaki
Differences in complications, cardiovascular risk factor, and diabetes management among participants enrolled at veterans affairs (VA) and non-VA medical centers in the glycemia reduction approaches in diabetes: A comparative effectiveness study (GRADE)., Hermes J Florez, Alokananda Ghosh, Rodica Pop-Busui, Sophia H Hox, Chantal Underkofler, M Diane McKee, Jean Park, Mary K Rhee, Tina Killean, Heidi Krause-Steinrauf, Vanita R Aroda, and Deborah J Wexler
Source and acquisition of rhizosphere microbes in Antarctic vascular plants, Sergio Guajardo-Leiva, Jaime Alarcón, Florence Gutzwiller, Jorge Gallardo-Cerda, Ian S. Acuña-Rodríguez, Marco Molina-Montenegro, Keith A. Crandall, Marcos Pérez-Losada, and Eduardo Castro-Nallar
[Multiple Endpoints in Oncology Clinical Trials], Toshimitsu Hamasaki and Frank Bretz
[What Is an Estimand?-The Most Important Clinical Question in Oncology Trials], Toshimitsu Hamasaki and Frank Bretz
ZnT8 autoantibody prevalence is low in youth with type 2 diabetes and associated with higher insulin sensitivity, lower insulin secretion, and lower disposition index, Janine Higgins, Philip Zeitler, Kimberly L. Drews, Silva Arslanian, Kenneth Copeland, Robin Goland, Georgeanna Klingensmith, Terri H. Lipman, and Sherida Tollefsen
Induction of mastitis by cow-to-mouse fecal and milk microbiota transplantation causes microbiome dysbiosis and genomic functional perturbation in mice, M Nazmul Hoque, M Shaminur Rahman, Tofazzal Islam, Munawar Sultana, Keith A. Crandall, and M Anwar Hossain
A Desirability of Outcome Ranking Analysis of a Randomized Clinical Trial Comparing Seven Versus Fourteen Days of Antibiotics for Uncomplicated Gram-Negative Bloodstream Infection, Jessica Howard-Anderson, Weixiao Dai, Dafna Yahav, Toshimitsu Hamasaki, Adi Turjeman, Fidi Koppel, Erica Franceschini, Carol Hill, Zoë Sund, Henry F. Chambers, Vance G. Fowler, Helen W. Boucher, Scott R. Evans, Mical Paul, Thomas L. Holland, and Sarah B. Doernberg
Improving Traditional Registrational Trial Endpoints: Development and Application of a Desirability of Outcome Ranking (DOOR) Endpoint for Complicated Urinary Tract Infection Clinical Trials, Jessica Howard-Anderson, Toshimitsu Hamasaki, Weixiao Dai, Deborah Collyar, Daniel Rubin, Sumathi Nambiar, Tori Kinamon, Carol Hill, Steven P. Gelone, David Mariano, Takamichi Baba, Thomas L. Holland, Sarah B. Doernberg, Henry F. Chambers, Vance G. Fowler, Scott R. Evans, and Helen W. Boucher
First or second trimester SARS-CoV-2 infection and subsequent pregnancy outcomes, Brenna L. Hughes, Grecio J. Sandoval, Torri D. Metz, Rebecca G. Clifton, William A. Grobman, George R. Saade, Tracy A. Manuck, Monica Longo, Amber Sowles, Kelly Clark, Hyagriv N. Simhan, Dwight J. Rouse, Hector Mendez-Figueroa, Cynthia Gyamfi-Bannerman, Jennifer Bailit, Maged M. Costantine, Harish M. Sehdev, Alan T. Tita, and George A. Macones
Mixture survival trees for cancer risk classification, Beilin Jia, Donglin Zeng, Jason J. Liao, Guanghan F. Liu, Xianming Tan, Guoqing Diao, and Joseph G. Ibrahim
Mediational Effects on Motivation to Quit Smoking After Exposure to a Cigarette Pictorial Warning Label Among Young Adults, Andrea C. Johnson, Monique M. Turner, Samuel J. Simmens, W Douglas Evans, Andrew A. Strasser, and Darren Mays
Unlocking capacities of genomics for the COVID-19 response and future pandemics, Sergey Knyazev, Karishma Chhugani, Varuni Sarwal, Ram Ayyala, Harman Singh, Smruthi Karthikeyan, Dhrithi Deshpande, Pelin Icer Baykal, Zoia Comarova, Angela Lu, Yuri Porozov, Tetyana I. Vasylyeva, Joel O. Wertheim, Braden T. Tierney, Charles Y. Chiu, Ren Sun, Aiping Wu, Malak S. Abedalthagafi, Victoria M. Pak, Shivashankar H. Nagaraj, Adam L. Smith, Pavel Skums, Bogdan Pasaniuc, Andrey Komissarov, Christopher E. Mason, Eric Bortz, Philippe Lemey, Fyodor Kondrashov, Niko Beerenwinkel, Tommy Tsan-Yuk Lam, Nicholas C. Wu, and Alex Zelikovsky
Prospective Validation of a Rapid Host Gene Expression Test to Discriminate Bacterial From Viral Respiratory Infection, Emily R. Ko, Ricardo Henao, Katherine Frankey, Elizabeth A. Petzold, Pamela D. Isner, Anja K. Jaehne, Nakia Allen, Jayna Gardner-Gray, Gina Hurst, Jacqueline Pflaum-Carlson, Namita Jayaprakash, Emanuel P. Rivers, Henry Wang, Irma Ugalde, Siraj Amanullah, Laura Mercurio, Thomas H. Chun, Larissa May, Robert W. Hickey, Jacob E. Lazarus, Shauna H. Gunaratne, Daniel J. Pallin, Guruprasad Jambaulikar, David S. Huckins, Krow Ampofo, Ravi Jhaveri, Yunyun Jiang, Lauren Komarow, Scott R. Evans, Geoffrey S. Ginsburg, L Gayani Tillekeratne, and Micah T. McClain
Early initiation of rivaroxaban after reperfusion therapy for stroke patients with nonvalvular atrial fibrillation, Junpei Koge, Hiroshi Yamagami, Kazunori Toyoda, Masahiro Yasaka, Teruyuki Hirano, Toshimitsu Hamasaki, Takehiko Nagao, Shinichi Yoshimura, Masahito Fujishige, Akira Tempaku, Shinichiro Uchiyama, Etsuro Mori, Masatoshi Koga, and Kazuo Minematsu
Effect of anterior approach compared to posterolateral approach on readiness for discharge and thrombogenic markers in patients undergoing unilateral total hip arthroplasty: a prospective cohort study, Kyle N. Kunze, Alexander S. McLawhorn, Kethy M. Jules-Elysee, Michael M. Alexiades, Natasha A. Desai, Yi Lin, Jonathan C. Beathe, Yan Ma, Wei Zhang, and Thomas P. Sculco
Gastrointestinal Microbiome Disruption and Antibiotic-Associated Diarrhea in Children Receiving Antibiotic Therapy for Community-Acquired Pneumonia, J Kwon, Y Kong, M Wade, D J. Williams, C B. Creech, S Evans, E B. Walter, J M. Martin, J S. Gerber, J G. Newland, M E. Hofto, M A. Staat, H F. Chambers, V G. Fowler, W C. Huskins, and M M. Pettigrew
Association of Estimated Time-in-Range Capillary Glucose Levels Versus HbA1c With Progression of Microvascular Complications in the Diabetes Control and Complications Trial, John M. Lachin, Ionut Bebu, Xiaoyu Gao, David M. Nathan, and Bernard Zinman
The effects of betamethasone on the amplitude integrated EEG of infants born at 34- or 35-weeks gestation, Abbot R. Laptook, Lina Chalak, Athina Pappas, Alexis Davis, Pablo J. Sanchez, Krisa P. Van Meurs, William Oh, Ross Sommers, Seetha Shankaran, Angelita M. Hensman, Dwight J. Rouse, Scott McDonald, Abhik Das, Ronald N. Goldberg, Namasivayam Ambalavanan, Cynthia Gyamfi-Bannerman, Elizabeth A. Thom, and Rosemary D. Higgins
The Earth BioGenome Project 2020: Starting the clock., Harris A Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L Allende, John M Archibald, Miklós Bálint, Katharine B Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L Blaxter, Jing Cai, Nicolette D Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K Childers, Jonathan A Coddington, Dalia A Conde, Montserrat Corominas, Keith A. Crandall, Andrew J Crawford, Federica DiPalma, Richard Durbin, ThankGod E Ebenezer, Scott V Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A Gibbs, M Thomas P Gilbert, Melissa M. Goldstein, Jennifer Marshall Graves, Henry T Greely, Igor V Grigoriev, Kevin J Hackett, Neil Hall, David Haussler, Kristofer M Helgen, Carolyn J Hogg, Sachiko Isobe, Kjetill Sigurd Jakobsen, Axel Janke, Erich D Jarvis, Warren E Johnson, Steven J M Jones, Elinor K Karlsson, Paul J Kersey, Jin-Hyoung Kim, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, James H Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A K Mazet, Camila J Mazzoni, Eugene W Myers, Rachel J O'Neill, Sadye Paez, Hyun Park, Gene E Robinson, Cristina Roquet, Oliver A Ryder, Jamal S M Sabir, H Bradley Shaffer, Timothy M Shank, Jacob S Sherkow, Pamela S Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L Wilson, Xun Xu, Huanming Yang, Anne D Yoder, and Guojie Zhang
Differential expression of single-cell RNA-seq data using Tweedie models, Himel Mallick, Suvo Chatterjee, Shrabanti Chowdhury, Saptarshi Chatterjee, Ali Rahnavard, and Stephanie C. Hicks
Physical Function in Middle-aged and Older Adults With Type 1 Diabetes: Long-term Follow-up of the Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Study, Catherine L. Martin, Victoria R. Trapani, Jye-Yu C. Backlund, Pearl Lee, Barbara H. Braffett, Ionut Bebu, John M. Lachin, Alan M. Jacobson, Rose Gubitosi-Klug, and William H. Herman
Plasma advanced glycation end products and the subsequent risk of microvascular complications in type 1 diabetes in the DCCT/EDIC, Vincent M. Monnier, David R. Sell, Xiaoyu Gao, Saul M. Genuth, John M. Lachin, and Ionut Bebu
An evaluation of seasonal maternal-neonatal morbidity related to trainee cycles, Ayamo Oben, Paula McGee, William A. Grobman, Jennifer L. Bailit, Ronald J. Wapner, Michael W. Varner, John M. Thorp, Steve N. Caritis, Mona Prasad, George R. Saade, Dwight J. Rouse, and Sean C. Blackwell
PREDICITION OF CEREBRAL PALSY OR DEATH AMONG PRETERM INFANTS WHO SURVIVE THE NEONATAL PERIOD, Alan Peaceman, Lisa Mele, Dwight J. Rouse, Kenneth J. Leveno, Brian Mercer, Michael Varner, Uma M. Reddy, Ronald Wapner, Yoram Sorokin, John M. Thorp, Susan Ramin, Fergal Malone, Mary J. O'Sullivan, Donald J. Dudley, and Steve N. Caritis
Reef Location and Client Diversity Influence the Skin Microbiome of the Caribbean Cleaner Goby Elacatinus evelynae, Ana Pereira, Marta C. Soares, Teresa Santos, Ana Poças, Marcos Pérez-Losada, Amy Apprill, Paul C. Sikkel, and Raquel Xavier
Comparative Analysis of Metagenomics and Metataxonomics for the Characterization of Vermicompost Microbiomes, Marcos Pérez-Losada, Dhatri Badri Narayanan, Allison R. Kolbe, Ignacio Ramos-Tapia, Eduardo Castro-Nallar, Keith A. Crandall, and Jorge Domínguez
Early Trajectory of Estimated Glomerular Filtration Rate and Long-term Advanced Kidney and Cardiovascular Complications in Type 1 Diabetes, Bruce A. Perkins, Ionut Bebu, Xiaoyu Gao, Amy B. Karger, Irl B. Hirsch, Harsha Karanchi, Mark E. Molitch, Bernard Zinman, John M. Lachin, and Ian H. de Boer
Metabolite, protein, and tissue dysfunction associated with COVID-19 disease severity, Ali Rahnavard, Brendan Mann, Abhigya Giri, Ranojoy Chatterjee, and Keith A. Crandall
Monitoring Infection and Antibiotic Treatment in the Skin Microbiota of Farmed European Seabass (Dicentrarchus Labrax) Fingerlings, Daniela Rosado, Marcos Pérez-Losada, Ricardo Severino, and Raquel Xavier
Biochemical Markers of Bone Turnover in Older Adults with Type 1 Diabetes, Mishaela R. Rubin, Ian H. de Boer, Jye-Yu C. Backlund, Valerie Arends, Rose Gubitosi-Klug, Amisha Wallia, Naina Sinha Gregory, Annette Barnie, Andrew J. Burghardt, John M. Lachin, Barbara H. Braffett, and Ann V. Schwartz
Cost-Efficient Multiply Matched Case-Control Study Designs, Grecio J. Sandoval, Ionut Bebu, and John M. Lachin
Risk factors for lower bone mineral density in older adults with type 1 diabetes: a cross-sectional study, Ann V. Schwartz, Jye-Yu C. Backlund, Ian H. de Boer, Mishaela R. Rubin, Annette Barnie, Kaleigh Farrell, Victoria R. Trapani, Naina Sinha Gregory, Amisha Wallia, Ionut Bebu, John M. Lachin, Barbara H. Braffett, and Rose Gubitosi-Klug
Relationship between Arterial Stiffness and Subsequent Cardiac Structure and Function in Young Adults with Youth-Onset Type 2 Diabetes: Results from the TODAY Study, Amy S. Shah, Samuel S. Gidding, Laure El ghormli, Jeanie B. Tryggestad, Kristen J. Nadeau, Fida Bacha, Lorraine E. Levitt Katz, Steven M. Willi, Joao Lima, and Elaine M. Urbina
Deep Ancestral Introgression Shapes Evolutionary History of Dragonflies and Damselflies, Anton Suvorov, Celine Scornavacca, M Stanley Fujimoto, Paul Bodily, Mark Clement, Keith A. Crandall, Michael F. Whiting, Daniel R. Schrider, and Seth M. Bybee
Bridging Therapy With Heparin Before Starting Rivaroxaban in Ischemic Stroke or Transient Ischemic Attack With Non-Valvular Atrial Fibrillation, Keisuke Tokunaga, Masahiro Yasaka, Kazunori Toyoda, Etsuro Mori, Teruyuki Hirano, Toshimitsu Hamasaki, Hiroshi Yamagami, Takehiko Nagao, Shinichi Yoshimura, Shinichiro Uchiyama, and Kazuo Minematsu
Medication adherence in young adults with youth-onset type 2 diabetes: iCount, an observational study, Paula M. Trief, Seth C. Kalichman, Dongliang Wang, Kimberly L. Drews, Barbara J. Anderson, Jane D. Bulger, and Ruth S. Weinstock
Medication adherence in young adults with youth-onset type 2 diabetes: iCount, an observational study, Paula M. Trief, Seth C. Kalichman, Dongliang Wang, Kimberly L. Drews, Barbara J. Anderson, Jane D. Bulger, and Ruth S. Weinstock
Diabetes Distress in Young Adults With Youth-Onset Type 2 Diabetes: TODAY2 Study Results, Paula M. Trief, Diane Uschner, Melinda Tung, Marsha D. Marcus, Maria Rayas, Sarah MacLeish, Ryan Farrell, Joyce Keady, Lily Chao, and Ruth S. Weinstock
Left Ventricular Structure, Tissue Composition, and Aortic Distensibility in the Diabetes Control and Complications Trial/Epidemiology of Diabetes Intervention and Complications, Evrim B. Turkbey, Jye-Yu C. Backlund, Neville Gai, Marcelo Nacif, Rob J. van der Geest, John M. Lachin, Anderson Armstrong, Gustavo J. Volpe, Saman Nazarian, João A. Lima, and David A. Bluemke
Dalbavancin as an option for treatment of S. aureus bacteremia (DOTS): study protocol for a phase 2b, multicenter, randomized, open-label clinical trial, Nicholas A. Turner, Smitha Zaharoff, Heather King, Scott Evans, Toshimitsu Hamasaki, Thomas Lodise, Varduhi Ghazaryan, Tatiana Beresnev, Todd Riccobene, Rinal Patel, Sarah B. Doernberg, Urania Rappo, Vance G. Fowler, and Thomas L. Holland
Preconception Cardiometabolic Markers and Birth Outcomes Among Women in the Hispanic Community Health Study/Study of Latinos, Catherine J. Vladutiu, Nicole M. Butera, Daniela Sotres-Alvarez, Alison M. Stuebe, Larissa Aviles-Santa, Martha L. Daviglus, Marc D. Gellman, Carmen R. Isasi, Christina Cordero, Gregory A. Talavera, Linda Van Horn, and Anna Maria Siega-Riz
Labor Induction at 39 Weeks Compared with Expectant Management in Low-Risk Parous Women, Stephen M. Wagner, Grecio Sandoval, William A. Grobman, Jennifer L. Bailit, Ronald J. Wapner, Michael W. Varner, John M. Thorp, Mona Prasad, Alan T. Tita, George R. Saade, Yoram Sorokin, Dwight J. Rouse, and Jorge E. Tolosa
Adiposity, related biomarkers, and type 2 diabetes after gestational diabetes: The Diabetes Prevention Program, Pandora L. Wander, Costas A. Christophi, Maria Rosario Araneta, Edward J. Boyko, Daniel A. Enquobahrie, Dana Dabelea, Ronald B. Goldberg, Steven E. Kahn, Catherine Kim, Xavier Pi-Sunyer, and William C. Knowler
Time Course for Benefit and Risk of Ticagrelor and Aspirin in Acute Ischemic Stroke or Transient Ischemic Attack, Yongjun Wang, Yuesong Pan, Hao Li, Pierre Amarenco, Hans Denison, Scott R. Evans, Anders Himmelmann, Stefan James, Mikael Knutsson, Per Ladenvall, Carlos A. Molina, and S Claiborne Johnston
Short- vs Standard-Course Outpatient Antibiotic Therapy for Community-Acquired Pneumonia in Children: The SCOUT-CAP Randomized Clinical Trial, Derek J. Williams, C. Buddy Creech, Emmanuel B. Walter, Judith M. Martin, Jeffrey S. Gerber, Jason G. Newland, Lee Howard, Meghan E. Hofto, Mary A. Staat, Randolph E. Oler, Bonifride Tuyishimire, Thomas M. Conrad, Marina S. Lee, Varduhi Ghazaryan, Melinda M. Pettigrew, Vance G. Fowler, Henry F. Chambers, Theoklis E. Zaoutis, Scott Evans, and W. Charles Huskins
Analysis of accumulated SARS-CoV-2 seroconversion in North Carolina: The COVID-19 Community Research Partnership, John C. Williamson, Thomas F. Wierzba, Michele Santacatterina, Iqra Munawar, Austin L. Seals, Christine Ann Pittman Ballard, Martha Alexander-Miller, Michael S. Runyon, Lewis H. McCurdy, Michael A. Gibbs, Amina Ahmed, William H. Lagarde, Patrick D. Maguire, Robin King-Thiele, Terri Hamrick, Abdalla Ihmeidan, Shakira Henderson, T Ryan Gallaher, Diane Uschner, Sharon L. Edelstein, David M. Herrington, and John W. Sanders
Deterioration of glycemic control in youth-onset type 2 diabetes: what are the early and late predictors?, Philip Zeitler, Laure El Ghormli, Silva Arslanian, Sonia Caprio, Elvira Isganaitis, Megan K. Kelsey, Ruth S. Weinstock, Neil H. White, and Kimberly Drews
Joint semiparametric models for case-cohort designs, Weibin Zhong and Guoqing Diao
Submissions from 2021
Each patient is a research biorepository: informatics-enabled research on surplus clinical specimens via the living BioBank., Alexander V Alekseyenko, Bashir Hamidi, Trevor D Faith, Keith A. Crandall, Jennifer G Powers, Christopher L Metts, James E Madory, Steven L Carroll, Jihad S Obeid, and Leslie A Lenert
Predictors of 30-Day Unplanned Readmission After Carotid Artery Stenting Using Artificial Intelligence., Amod Amritphale, Ranojoy Chatterjee, Suvo Chatterjee, Nupur Amritphale, Ali Rahnavard, G Mustafa Awan, Bassam Omar, and Gregg C Fonarow
Predictors of 30-Day Unplanned Readmission After Carotid Artery Stenting Using Artificial Intelligence., Amod Amritphale, Ranojoy Chatterjee, Suvo Chatterjee, Nupur Amritphale, Ali Rahnavard, G Mustafa Awan, Bassam Omar, and Gregg C Fonarow
Moderation of the effect of glycemia on the risk of cardiovascular disease in type 1 diabetes: The DCCT/EDIC study., Ionut Bebu, Barbara H. Braffett, Trevor J Orchard, Gayle M Lorenzi, David M Nathan, William H Herman, and John M. Lachin
Development of novel measures for Alzheimer's disease prevention trials (NoMAD)., Sophie A Bell, Hannah R Cohen, Seonjoo Lee, Hyun Kim, Adam Ciarleglio, Howard Andrews, Andres M Rivera, Kay Igwe, Adam M Brickman, D P Devanand, Philip D Harvey, Lon S Schneider, and Terry E Goldberg
HAPHPIPE: Haplotype Reconstruction and Phylodynamics for Deep Sequencing of Intrahost Viral Populations., Matthew L. Bendall, Keylie M. Gibson, Margaret C. Steiner, Uzma Rentia, Marcos Pérez-Losada, and Keith A. Crandall
A synthesis tree of the Copepoda: Integrating phylogenetic and taxonomic data reveals multiple origins of parasitism, James P. Bernot, G A. Boxshall, and Keith A. Crandall
Long-Term Complications in Youth-Onset Type 2 Diabetes., Petter Bjornstad, Kimberly L. Drews, Sonia Caprio, Rose Gubitosi-Klug, David M Nathan, Bereket Tesfaldet, Jeanie Tryggestad, Neil H White, and Philip Zeitler
The evolutionary diversity of barnacles, with an updated classification of fossil and living forms, Benny K.K. Chan, Niklas Dreyer, Andy S. Gale, Henrik Glenner, Christine Ewers-Saucedo, Marcos Pérez-Losada, Gregory A. Kolbasov, Keith A. Crandall, and Jens T. Høeg
Determinants of lower-extremity injury severity and recovery in U.S. High School Soccer Players., Avinash Chandran, Angelo Elmi, Heather Young, and Loretta DiPietro
Educational Value of Endoscopic Versus Microscopic Ear Surgery., Alexander Chern, Rahul K Sharma, Sarah E Maurrasse, Madeleine A Drusin, Adam J. Ciarleglio, and Justin S Golub
Study of emotional distress in a comparative effectiveness trial of diabetes treatments: Rationale and design., Andrea L Cherrington, Heidi Krause-Steinrauf, Ionut Bebu, Aanand D Naik, Elizabeth Walker, Sherita H Golden, and Jeffrey S Gonzalez
Comparing the Clinical Utility of Rapid Diagnostics for Treatment of Bloodstream Infections Using Desirability of Outcome Ranking Approach for the Management of Antibiotic Therapy (DOOR-MAT)., Kimberly C Claeys, Teri L Hopkins, Kathryn Schlaffer, Stephanie Hitchcock, Yunyun Jiang, Scott Evans, J Kristie Johnson, and Surbhi Leekha
Identification of CRF89_BF, a new member of an HIV-1 circulating BF intersubtype recombinant form family widely spread in South America., Elena Delgado, Aurora Fernández-García, Marcos Pérez-Losada, María Moreno-Lorenzo, Ismael Fernández-Miranda, Sonia Benito, Vanessa Montero, Horacio Gil, Silvia Hernáez, Josefa Muñoz, Miren Z Zubero-Sulibarria, Elena García-Bodas, Mónica Sánchez, Jorge Del Romero, Carmen Rodríguez, Luis Elorduy, Elena Bereciartua, Esther Culebras, Icíar Rodríguez-Avial, María Luisa Giménez-Alarcón, Carmen Martín-Salas, Carmen Gómez-González, José J García-Irure, Gema Cenzual, Ana Martínez-Sapiña, María Maiques-Camarero, Lucía Pérez-Álvarez, and Michael M Thomson
Earthworms drastically change fungal and bacterial communities during vermicomposting of sewage sludge, Jorge Domínguez, Manuel Aira, Keith A. Crandall, and Marcos Pérez-Losada
Inflammation in children with cystic fibrosis: contribution of bacterial production of long-chain fatty acids., Erin Felton, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C. Koumbourlis, Robert J. Freishtat, Keith A. Crandall, and Andrea Hahn
Mediators of the improvement in heart failure outcomes with empagliflozin in the EMPA-REG OUTCOME trial., David Fitchett, Silvio E Inzucchi, Bernard Zinman, Christoph Wanner, Martin Schumacher, Claudia Schmoor, Kristin Ohneberg, Anne Pernille Ofstad, Afshin Salsali, Jyothis T George, Stefan Hantel, Erich Bluhmki, John M. Lachin, and Faiez Zannad
Composite outcomes for pain clinical trials: considerations for design and interpretation., Jennifer S Gewandter, Michael P McDermott, Scott Evans, Nathaniel P Katz, John D Markman, Lee S Simon, Dennis C Turk, and Robert H Dworkin
COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker data model, Nikhita Gogate, Daniel Lyman, Amanda Bell, Edmund Cauley, Keith A. Crandall, Ashia Joseph, Robel Kahsay, Darren A. Natale, Lynn M. Schriml, Sabyasach Sen, and Raja Mazumder
Prediction of vaginal birth after cesarean delivery in term gestations: a calculator without race and ethnicity., William A Grobman, Grecio Sandoval, Madeline Murguia Rice, Jennifer L Bailit, Suneet P Chauhan, Maged M Costantine, Cynthia Gyamfi-Bannerman, Torri D Metz, Samuel Parry, Dwight J Rouse, George R Saade, Hyagriv N Simhan, John M Thorp, Alan T N Tita, Monica Longo, and Mark B Landon
Importance of beta-lactam pharmacokinetics and pharmacodynamics on the recovery of microbial diversity in the airway of persons with cystic fibrosis, Andrea Hahn, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C. Koumbourlis, Robert J. Freishtat, Edith T. Zemanick, Stan Louie, and Keith A. Crandall
SARS-CoV-2 infection reduces human nasopharyngeal commensal microbiome with inclusion of pathobionts, M. Nazmul Hoque, Md Murshed Hasan Sarkar, M. Shaminur Rahman, Shahina Akter, Tanjina Akhtar Banu, Barna Goswami, Iffat Jahan, M. Saddam Hossain, A. K.Mohammad Shamsuzzaman, Tasnim Nafisa, M. Maruf Ahmed Molla, Mahmuda Yeasmin, Asish Kumar Ghosh, Eshrar Osman, S. K.Saiful Alam, Mohammad Samir Uzzaman, Md Ahashan Habib, Abu Sayeed Mohammad Mahmud, Keith A. Crandall, Tofazzal Islam, and Md Salim Khan
Exon probe sets and bioinformatics pipelines for all levels of fish phylogenomics, Lily C. Hughes, Guillermo Ortí, Hadeel Saad, Chenhong Li, William T. White, Carole C. Baldwin, Keith A. Crandall, Dahiana Arcila, and Ricardo Betancur-R
Author Correction: Genome-wide analysis of SARS-CoV-2 virus strains circulating worldwide implicates heterogeneity (Scientific Reports, (2020), 10, 1, (14004), 10.1038/s41598-020-70812-6), M. Rafiul Islam, M. Nazmul Hoque, M. Shaminur Rahman, A. S.M.Rubayet Ul Alam, Masuda Akther, J. Akter Puspo, Salma Akter, Munawar Sultana, Keith A. Crandall, and M. Anwar Hossain
The genus Creaserinus Hobbs, 1973 (Decapoda: Cambaridae) in Texas, Daniel P. Johnson, David B. Stern, and Keith A. Crandall
More robust estimation of average treatment effects using kernel optimal matching in an observational study of spine surgical interventions., Nathan Kallus, Brenton Pennicooke, and Michele Santacatterina
A simple framework to identify optimal cost-effective risk thresholds for a single screen: Comparison to Decision Curve Analysis, Hormuzd A. Katki and Ionut Bebu
Evaluating the effect of a community score card among pregnant and breastfeeding women living with HIV in two districts in Malawi., Megan Kays, Godfrey Woelk, Tegan Callahan, Leila Katirayi, Michele Montandon, Felluna Chauwa, Anne Laterra, Veena Sampathkumar, Dumbani Kayira, Thokozani Kalua, Erin Kazemi, Heather Hoffman, and Surbhi Modi
Multivariable association discovery in population-scale meta-omics studies., Himel Mallick, Ali Rahnavard, Lauren J McIver, Siyuan Ma, Yancong Zhang, Long H Nguyen, Timothy L Tickle, George Weingart, Boyu Ren, Emma H Schwager, Suvo Chatterjee, Kelsey N Thompson, Jeremy E Wilkinson, Ayshwarya Subramanian, Yiren Lu, Levi Waldron, Joseph N Paulson, Eric A Franzosa, Hector Corrada Bravo, and Curtis Huttenhower
Facing Our Fears: The Impact of a 4-Day Training Intervention to Reduce Negative Perspectives on Sexual and Gender Minorities among Religious Leaders in Kenya., David Kuria Mbote, Esther Mombo, Zablon Bundi Mutongu, Anthony Mkutu, Adam Ciarleglio, and Theo G M Sandfort
Sex Differences in Management and Outcomes of Cardioembolic Stroke: Post HOC Analyses of the RELAXED Study., Takashi Okada, Kazutaka Uchida, Fumihiro Sakakibara, Hiroto Kageyama, Masahiro Yasaka, Kazunori Toyoda, Etsuro Mori, Teruyuki Hirano, Toshimitsu Hamasaki, Hiroshi Yamagami, Takehiko Nagao, Shinichiro Uchiyama, Kazuo Minematsu, and Shinichi Yoshimura
The effect of patient age on discharge destination and complications after lumbar spinal fusion., Brenton Pennicooke, Michele Santacatterina, Jennifer Lee, Eric Elowitz, and Nathan Kallus
Felsenstein Phylogenetic Likelihood, David Posada and Keith A. Crandall
Reply to Villar et al., Michael Proschan and Scott Evans