Unlocking capacities of genomics for the COVID-19 response and future pandemics

Sergey Knyazev, Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.
Karishma Chhugani, Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, USA.
Varuni Sarwal, Department of Computer Science, University of California Los Angeles, Los Angeles, CA, USA.
Ram Ayyala, Department of Translational Biomedical Informatics, University of Southern California, Los Angeles, CA, USA.
Harman Singh, Department of Electrical Engineering, Indian Institute of Technology, Hauz Khas, New Delhi, India.
Smruthi Karthikeyan, Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA.
Dhrithi Deshpande, Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, USA.
Pelin Icer Baykal, Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Zoia Comarova, Astani Department of Civil and Environmental Engineering, University of Southern California, Los Angeles, CA, USA.
Angela Lu, Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, USA.
Yuri Porozov, World-Class Research Center "Digital biodesign and personalized healthcare", I.M. Sechenov First Moscow State Medical University, Moscow, Russia.
Tetyana I. Vasylyeva, Department of Medicine, University of California, San Diego, La Jolla, CA, USA.
Joel O. Wertheim, Department of Medicine, University of California, San Diego, La Jolla, CA, USA.
Braden T. Tierney, Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.
Charles Y. Chiu, Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA, USA.
Ren Sun, Department of Molecular and Medical Pharmacology, University of California, Los Angeles, Los Angeles, CA, USA.
Aiping Wu, Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.
Malak S. Abedalthagafi, Genomics Research Department, Saudi Human Genome Project, King Fahad Medical City and King Abdulaziz City for Science and Technology, Riyadh, Saudi Arabia.
Victoria M. Pak, Emory University, School of Nursing, Atlanta, GA, CA, USA.
Shivashankar H. Nagaraj, Centre for Genomics and Personalised Health, Queensland University of Technology, Brisbane, Queensland, Australia.
Adam L. Smith, Astani Department of Civil and Environmental Engineering, University of Southern California, Los Angeles, CA, USA.
Pavel Skums, Department of Computer Science, College of Art and Science, Georgia State University, Atlanta, GA, USA.
Bogdan Pasaniuc, Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.
Andrey Komissarov, Smorodintsev Research Institute of Influenza, Saint Petersburg, Russia.
Christopher E. Mason, Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.
Eric Bortz, Department of Biological Sciences, University of Alaska Anchorage, Anchorage, AK, CA, USA.
Philippe Lemey, Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven-University of Leuven, Leuven, Belgium.
Fyodor Kondrashov, Institute of Science and Technology Austria, Klosterneuburg, Austria.
Niko Beerenwinkel, Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Tommy Tsan-Yuk Lam, State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong SAR, P.R. China.
Nicholas C. Wu, Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Alex Zelikovsky, Department of Computer Science, College of Art and Science, Georgia State University, Atlanta, GA, USA.

Document Type

Journal Article

Publication Date

4-1-2022

Journal

Nature methods

Volume

19

Issue

4

DOI

10.1038/s41592-022-01444-z

Department

Biostatistics and Bioinformatics

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